CDS

Accession Number TCMCG057C44861
gbkey CDS
Protein Id XP_018447075.1
Location join(10343435..10343752,10343897..10343933,10343936..10344148,10344294..10344442,10344525..10344770,10344901..10345092,10345176..10345445)
Gene LOC108818654
GeneID 108818654
Organism Raphanus sativus

Protein

Length 475aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018591573.1
Definition PREDICTED: LOW QUALITY PROTEIN: RNA-binding KH domain-containing protein PEPPER-like [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category A
Description K homology RNA-binding domain
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03019        [VIEW IN KEGG]
KEGG_ko ko:K21444        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0003006        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006351        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009299        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009908        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0018130        [VIEW IN EMBL-EBI]
GO:0019438        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032774        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0034654        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048367        [VIEW IN EMBL-EBI]
GO:0048438        [VIEW IN EMBL-EBI]
GO:0048467        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048577        [VIEW IN EMBL-EBI]
GO:0048579        [VIEW IN EMBL-EBI]
GO:0048580        [VIEW IN EMBL-EBI]
GO:0048581        [VIEW IN EMBL-EBI]
GO:0048583        [VIEW IN EMBL-EBI]
GO:0048585        [VIEW IN EMBL-EBI]
GO:0048586        [VIEW IN EMBL-EBI]
GO:0048587        [VIEW IN EMBL-EBI]
GO:0048608        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050793        [VIEW IN EMBL-EBI]
GO:0051093        [VIEW IN EMBL-EBI]
GO:0051239        [VIEW IN EMBL-EBI]
GO:0051241        [VIEW IN EMBL-EBI]
GO:0061458        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0090567        [VIEW IN EMBL-EBI]
GO:0097659        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901362        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:2000026        [VIEW IN EMBL-EBI]
GO:2000028        [VIEW IN EMBL-EBI]
GO:2000241        [VIEW IN EMBL-EBI]
GO:2000242        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCCGCCGTCGCAGATTCCGTGGAGAACGGCACAACAAACTTCCCTGAGAATCAAATCCCCATACCTTCCGGAGCCCCTGCCACCACACTGCTTAACGAAAACTCCGACGCCTTCCCTGAACTGAACCAACCGGACACCTCAGCGGCGGAGAGATGGCCGGGCTGGCCTGGAGATTGCGTGTTTCGAGTGATCGTCCCCGTATCTAAAGTCGGAGCAATCATCGGACGTAAAGGAGACATCATCAGAAAGATGTGCGAGGAGACTCGCGCTCGCATCAAAGTCCTCGACGGTCCCGCCACCACTCAAGATCGCGTCGTGTTAATATCTGCAAAGGAAGAGCCGGAGGCGTACATCATGGAGGCAGTCGTGAGGGTGTTCAGACGAGTTTCGGGGTTGCCTGATAACGAAGATGATGATGATGTTCAAAACGCTGGAAGTGGCTTGTCTTCTTCGGTGCGGTTACTAGTCACGTCAATGCAGGCGATAAACTTGATTGGGAAGCAAGGTTCCTCTATTAAATCAATCGTAGAGAGCTCTGGTGCATCAGTTCGCGTTTTACCAGAAGAGGACACACCGTTTTATGCTGGGCAAGATGAGAGGATAGTGGATGTGCAAGGAGAAGCTTTAAAGATTGTAAAAGCGTTAGAAGCGATTGTTGGCCACCTAAGGAAGTTTCTAGTCGCCCATTCTGTGGTTCCTCTCTTCGAGAAGCAACACTTAGCTAGAGTCTCTCAAGTTCGTCAGGAAGAACCGTTAGCTGAAAACAAGTCATCTCTCCATACTATTCCGACAAATGTAATGGAGTCTGATCTCTCCCTCTTAGCACGGAGTGAACCTCGGTTTTTGGAGCGTGATCCTCGGGTGGAGTCACGTGTTCAGCCTTCAGCAGCGTCTATCTACAATCAGGATCCTGTACTGTCCGCCACCCTTGCTCGTGTTTCTGCTGCTTTTGTTACACAGGTATCTCAAACGATGCAAATACCGTTCTCCTACGCTGAGGATATTATTGGGTTAGAAGGAGCTAATATAGCCTTCATCCGCCAAAGAAGCGGAGCTACAGTTACCATTAAAGAGAGTCCACATCCTGATGAAATCACAGTGGAAATCAAAGGCACCTCTTCTCAAGTACATACTGCTCAGCAACTAATTCAAGAGTTCATCAGCAATCACAAGGAACCAGCTTCGGTTTCAGGTGGATATGCTAGAGTCGACACTGGCTATGTACCTGCTGTATATACTCCTCAGCTGAGCAACCGTCAAGAGCCGCTCTCGAGTACCACCTACACGGGCACAGAGACGGTGCAGTACAGACCAACATCATACTCTCAGCTGCCTGGTCCGTCGACTCTGACTGGGCAAACTTATGATACGGAATATAGGCCAGCTTCCGATGGTAATGGCTACAGCAGTTACAATTTATGA
Protein:  
MAAVADSVENGTTNFPENQIPIPSGAPATTLLNENSDAFPELNQPDTSAAERWPGWPGDCVFRVIVPVSKVGAIIGRKGDIIRKMCEETRARIKVLDGPATTQDRVVLISAKEEPEAYMXMEAVVRVFRRVSGLPDNEDDDDVQNAGSGLSSSVRLLVTSMQAINLIGKQGSSIKSIVESSGASVRVLPEEDTPFYAGQDERIVDVQGEALKIVKALEAIVGHLRKFLVAHSVVPLFEKQHLARVSQVRQEEPLAENKSSLHTIPTNVMESDLSLLARSEPRFLERDPRVESRVQPSAASIYNQDPVLSATLARVSAAFVTQVSQTMQIPFSYAEDIIGLEGANIAFIRQRSGATVTIKESPHPDEITVEIKGTSSQVHTAQQLIQEFISNHKEPASVSGGYARVDTGYVPAVYTPQLSNRQEPLSSTTYTGTETVQYRPTSYSQLPGPSTLTGQTYDTEYRPASDGNGYSSYNL